It is likely that initially tests will be carried out with full track possession under appropriate waiver so that signaling system upgrades won't be necessary to carry out such tests. That is what was done when Acelas were originally tested and also way back when Metroliners and Turbo Trains were tested on the same track segment for high speed tests.
Full track possession is a testing environment that I assume has the following special conditions:
1. all four tracks will be sealed, 'quarantined' if you will, so that if anything (including the train itself) comes off the tracks, it won't take another with it.
2. passenger platforms on all the stations in between New Brunswick and Trenton, which are Jersey Ave., Princeton Jct., and Hamilton, will be off limits for the same reason, and also for safety against vulnerable catenary snapping (although I have observed the planned addition of new catenary poles or upside down "U" structures going up in between the present structures; to quicken the ability of the wires to handle these speeds while Amtrak gangs replace them with constant tension; then the old stuff comes down and the new ones are the new permanents).
3. to ensure that the 'quarantined' tracks have a minimal disruption to normal operations and traffic, these tests will occur at night?
I would love to watch this live, history unfold if you will, and would be willing to sit in Princeton Jct.'s parking lot on a blanket (if dates are provided, other AU members welcome!! let's talk!!!). Wow...