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Thank you all for your insights. I definitely came to the right place! I make the SD to SF trip several times a year, and keep hoping a more commuter-friendly form of transportation will come along. I'm so fed up with air travel and detest making that long drive. It's surprising to me - and...

Wow, such detailed responses-unbelievably helpful!! TiBike, thank you especially for taking the time to lay that all out. I didn't realize passenger trains stopped for freight, I'm surprised to hear they share or cross tracks at all. I'm still a bit stumped by the travel time comparisons...

Happy Trails all, What is the best way to Amtrak from San Diego to the Bay Area? By 'best' I mean the most direct, shortest total duration with the fewest stops. I have looked over the different itineraries offered and see that I can take: Surfliner + Starlight (SD to SLO + SLO to...